AND
CCS811 (NOT USED in POCBreath_V2_smd_commercial)
Dependencies: mbed
Revision 5:3ba375562c74, committed 2020-05-01
- Comitter:
- christodoulos
- Date:
- Fri May 01 14:30:55 2020 +0000
- Parent:
- 4:54dc2a95c130
- Commit message:
- CCS811 (NOT USED in POCBreath_V2_smd_commercial)
Changed in this revision
--- a/flow.h Fri Jul 26 09:31:58 2019 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,179 +0,0 @@
-#include "mbed.h"
-
-// First the inputs and pins are defined
-
-AnalogIn flowIn(PA_0);
-Serial co2(PC_10,PC_11);
-AnalogIn sensor1(PC_0);
-AnalogIn sensor2(PC_1);
-AnalogIn sensor3(PC_2);
-AnalogIn sensor4(PC_3);
-AnalogIn sensor5(PA_4);
-AnalogIn sensor6(PA_5);
-AnalogIn sensor7(PA_6);
-AnalogIn sensor8(PA_7);
-AnalogIn temp(PA_1);
-
-///////////////////// FLOW LOOP /////////////////////////
-float finalflow;
-float flowVal1;
-float flowVal2;
-float P1;
-int flag=0;
-int o=0;
-float bpArray[10];
-float fp;float sp;
-float FPressure;
-float flow()
-{
- while(1)
- {
- wait(0.01);
- flowVal1=3.3*flowIn; //Logic level 3.3
- flowVal2 = 1.5*flowVal1; //5v
- P1 =(125*flowVal2)-62.5; //Pressure
- //making the value of pressure positive inside the SQRT function:
- if(flag==0)
- {
- finalflow=0;
- bpArray[o]=P1;
- sp+=bpArray[o];
- o=o+1;
- if (o=9)
- {
- fp=sp/10;
- flag=1;
- }
- }
- if (flag==1)
- {
- FPressure=P1-fp;
- finalflow=(0.24*sqrt(FPressure)); //flow in litter per second
- return finalflow;
- }
- }
-}
-
-///////////////////// CO2 LOOP /////////////////////////
-int value;
-float carbon()
-{
- bool allow = false;
- char c;
- char co2_measure[5];
- int count=0;
-
- while(1)
- {
- c = co2.getc();
- //based on the user manual PDF for the CO2 sensor, the value starts with "Z"
- //and we need to extract the right number of CO2 value
- if(c=='Z') {
- allow = true;
- }
-
- if(allow) {
- if(c>=48 && c<=57) {
- co2_measure[count]=c;
- count++;
- }
-
- if(count>=6) {
- value = ((co2_measure[0]-'0')*100000+co2_measure[1]-'0')*10000+(co2_measure[2]-'0')*1000+(co2_measure[3]-'0')*100;
- float CAR;
- CAR=(float)value/10000;
- count=0;
- allow=false;
- return CAR;
- }
- }
- }
-}
-
-///////////////////// TEMPERATURE LOOP /////////////////////////
-
-float t2Cel;
-
-float getTemp()
-{
- while(1) {
- float B = 3478; //Define thermistor constant
- float rRef=10e3; // Define reference resistance
- float r1=10e3; // Define thermistor resistance at 25 C
- float t1=25+273; // Define thermistor initial temperature s 25C in Kelvin
- float x = temp.read(); //Measure input voltage at pin A0 in bits
- float v = 3.3*x; //Convert bits into voltage
- float r2 = (3.3*rRef/v)-rRef; //Convert voltage into thermistor resistance
- float t2 = (B*t1)/(B-t1*log(r1/r2)); //Convert thermistor resistance into temperature in Kelvin (log means natural logarithm ln)
- t2Cel = t2-273; //Convert temperature from Kelvin to Celcius
- return t2Cel;
-// printf("Temp: %f\n", t2Cel);
- }
-}
-
-///////////////////// 8-CHANNEL SENSOR LOOP /////////////////////////
-
-float s1()
-{
- float sen1;
- while(1){
- sen1=sensor1*3.3;
- return sen1;
- }
-}
-float s2()
-{
- float sen2;
- while(1){
- sen2=sensor2*3.3;
- return sen2;
- }
-}
-float s3()
-{
- float sen3;
- while(1){
- sen3=sensor3*3.3;
- return sen3;
- }
-}
-float s4()
-{
- float sen4;
- while(1){
- sen4=sensor4*3.3;
- return sen4;
- }
-}
-float s5()
-{
- float sen5;
- while(1){
- sen5=sensor5*3.3;
- return sen5;
- }
-}
-float s6()
-{
- float sen6;
- while(1){
- sen6=sensor6*3.3;
- return sen6;
- }
-}
-float s7()
-{
- float sen7;
- while(1){
- sen7=sensor7*3.3;
- return sen7;
- }
-}
-float s8()
-{
- float sen8;
- while(1){
- sen8=sensor8*3.3;
- return sen8;
- }
-}
\ No newline at end of file
--- a/main.cpp Fri Jul 26 09:31:58 2019 +0000
+++ b/main.cpp Fri May 01 14:30:55 2020 +0000
@@ -1,222 +1,79 @@
#include "mbed.h"
-#include "flow.h"
+
+Serial pc(PC_12, PD_2);
+I2C i2c(PC_1,PC_0);
+DigitalOut wake(PB_2);
-/////////////////////////
-// In this version of the program developed for the Breath project, flow and CO2, as well as 8 channel sensors,
-// are measured in a separate .h file called: "flow.h" which is included in the
-// main code. So 10 sets of data is streamed using a serial connection (TTL cable or Bluetooth)
-// without any intruption.
-// This version is especially suitable to be used for KST.
-// Also, a solenoid would be turned on and off based on calculating the standard deviation in CO2 profile.
-//
-// START POINT: calculates SD for 9 samples of CO2, if it's grater than 0.02 it enables the solenoid.
-// END POINT: calculates SD for 9 samples of CO2, if it's grater thatn 0.05 it disables the solenoid.
-//
-// You can easily change the threshold of Standard deviation to detect plateau
-//
-// Generated by: Mehrnaz Javadipour
-//////////////////////////
+uint16_t eco2, tvoc;
-Serial ttl(PC_12,PD_2); //TTL cable TX,RX
-DigitalOut sol(PC_5); //Solenoid: Digital Output
-PwmOut led(PB_6);
-
-
-
+
int main()
{
- ttl.baud(9600); //baudrate for the serial connection
- flow(); //calling flow from flow.h
- carbon(); //calling CO2 from flow.h
- s1(); //calling 8 channels from flow.h
- s2();
- s3();
- s4();
- s5();
- s6();
- s7();
- s8();
- getTemp(); //calling Temperature from flow.h
+ int addr=0xB4;
+ wake=0;
+ // FIRST NEED TO INIT TO APP_START
+ //CHECK SYSTEM 1, PUT IN APP MODE, CECK SYSTEM 2, SET MODE
- //////////////////////////////
- // I defined a flag for each section of specific functions, so by enabling the
- // flag the section starts and by disabling the flag it finishes the section.
- // at the end of the program, I reset the flags so it would be ready for the next loop.
- /////////////////////////////
-
- int bf=0; //FLAG for detecting base flow
- int i=0;
- float bfArray[4]; //sampling flow for finding the average base flow
- float sf=0; //sum of flow samples for calculating base flow
- float fv=0; //final value of base flow
-
- int measurement_started=0; //FLAG for starting calculations after detecting breath
+ char wID[1];
+ wID[0]=0x20;
+ char rID[1];
- int solstart=0; //FLAG for starting calculations for detecting plateau
- int m=0;
- int myArray[9]; //sampling 9 values of CO2
- unsigned int sum=0; //sum of 9 samples of CO2
- int avg=0; //average of 9 samples of CO2
- int difSum=0; //used for the Standard deviation algorithm
- long double var=0.0; //used for the Standard deviation algorithm
- float sigma=0.0; //final value for standar deviation
- int flags=0; //FLAG for keep taking samples from CO2 profile when it's too early to detect plateau
+ i2c.write(addr,wID,1);
+ i2c.read(addr,rID,1);
+ pc.printf("ID: %x\n",rID[0]);
+ wait(1);
+
+ char wS[1];
+ wS[0]=0x00;
+ char rS[1];
- int solend=0; //FLAG for ending calculations for detecting plateau
- unsigned int sum2=0; //same as before; used for finding standard deviation
- long double var2=0.0;
- float sigma2=0.0;
- int difSum2=0;
- int avg2=0;
- int flage=0; //FLAG for keep taking samples from CO2 profile when it's too early to finish plateau
-
- int fin=0;
-
-
-
- while(1)
- {
- led=1.00f; //an LED is fully turned on at the beginning, the brightness will be reduced when the plateau is detected.
- ttl.printf("%f,%f,%f,%f,%f,%f,%f,%f,%f,%f,%f\n",getTemp(),flow(), carbon(),s1(),s2(),s3(),s4(),s5(),s6(),s7(),s8());
+ i2c.write(addr,wS,1);
+ i2c.read(addr,rS,1);
+ pc.printf("Status before init: %x\n",rS[0]);
+ wait(1);
- if (bf==0) //finding base flow before breath
- {
- for(i=0; i<4; i++)
- {
- bfArray[i]=flow();
- sf+=bfArray[i];
- }
- fv=sf/4;
- fv=fv+0.2;
- //ttl.printf("set\n");
- bf=1;
- }
-
- //Starts calculations when it detects breathing into the device:
-
- if ((flow()>fv) and (measurement_started ==0))
- {
- measurement_started = 1;
- }
-
- //Starts detecting plateau:
-
- if ((measurement_started == 1) and (solstart==0))
- {
- //Takes 9 samples of CO2:
- //I have also included printing the values inside the loops so we don't loose any data during calculatins.
- for(m=0;m<9;m++)
- {
- ttl.printf("%f,%f,%f,%f,%f,%f,%f,%f,%f,%f,%f\n",getTemp(),flow(), carbon(),s1(),s2(),s3(),s4(),s5(),s6(),s7(),s8());
- myArray[m]=carbon();
- }
- while(flags==0)
- {
- //While "flags" is enabled, keeps calculating the standard deviation.
- for(int m=0;m<9;m++)
- {
- ttl.printf("%f,%f,%f,%f,%f,%f,%f,%f,%f,%f,%f\n",getTemp(),flow(), carbon(),s1(),s2(),s3(),s4(),s5(),s6(),s7(),s8());
- sum+=myArray[m];
- }
- avg=sum/9;
- for(int m=0;m<9;m++)
- {
- ttl.printf("%f,%f,%f,%f,%f,%f,%f,%f,%f,%f,%f\n",getTemp(),flow(), carbon(),s1(),s2(),s3(),s4(),s5(),s6(),s7(),s8());
- difSum+=(myArray[m]-avg)*(myArray[m]-avg); //Find sum of difference between value X and mean
- }
- var=difSum/9;
- sigma=sqrt(var);
- if (sigma<0.02)
- {
-
- //if SD is less than 0.02 it means that it is too early to start the plateau
- //So we shift all but the first sample and define the new set of arrays:
-
- for(int m=0;m<8;m++)
- {
- ttl.printf("%f,%f,%f,%f,%f,%f,%f,%f,%f,%f,%f\n",getTemp(),flow(), carbon(),s1(),s2(),s3(),s4(),s5(),s6(),s7(),s8());
- myArray[m]=myArray[m+1]; //Shift all CO2 values to the left by 1 value
- }
- myArray[8]=carbon(); //assign a new value for the 9th sample
- }
- //The new set of arrays are now generated and is sent back to be used for preveious SD calculations.
- //If sigma for the new set is still small, a newer set will be generated and replaced
- //Otherwise, it's accepted and will turn on the solenoid:
- else
- {
- ttl.printf("%f,%f,%f,%f,%f,%f,%f,%f,%f,%f,%f\n",getTemp(),flow(), carbon(),s1(),s2(),s3(),s4(),s5(),s6(),s7(),s8());
- sol=1; //Solenoid is ON
- led=0.50f; //The brightness is reduced to half during the plateau
- flags=1; //breakes the while loop
- }
- }
- solend=1; //prepares the next section for finishing the plateau
- solstart =1;
- }
- if ((measurement_started == 1) and (solend==1))
- {
- // same process happens for finishing the plateau:
-
- for(m=0;m<9;m++)
- {
- ttl.printf("%f,%f,%f,%f,%f,%f,%f,%f,%f,%f,%f\n",getTemp(),flow(), carbon(),s1(),s2(),s3(),s4(),s5(),s6(),s7(),s8());
- myArray[m]=carbon();
- }
- while(flage==0)
- {
- for(int m=0;m<9;m++)
- {
- ttl.printf("%f,%f,%f,%f,%f,%f,%f,%f,%f,%f,%f\n",getTemp(),flow(), carbon(),s1(),s2(),s3(),s4(),s5(),s6(),s7(),s8());
- sum2+=myArray[m];
- }
- avg2=sum2/9;
- for(int m=0;m<9;m++)
- {
- ttl.printf("%f,%f,%f,%f,%f,%f,%f,%f,%f,%f,%f\n",getTemp(),flow(), carbon(),s1(),s2(),s3(),s4(),s5(),s6(),s7(),s8());
- difSum2+=(myArray[m]-avg2)*(myArray[m]-avg2);
- }
- var2=difSum2/9;
- sigma2=sqrt(var2);
- if (sigma2<0.05)
- {
- // here we defined the end threshold to be 0.05, it can be changed later based on experiment results
- for(int m=0;m<8;m++)
- {
- ttl.printf("%f,%f,%f,%f,%f,%f,%f,%f,%f,%f,%f\n",getTemp(),flow(), carbon(),s1(),s2(),s3(),s4(),s5(),s6(),s7(),s8());
- myArray[m]=myArray[m+1];
- }
- myArray[8]=carbon();
- }else
- {
- ttl.printf("%f,%f,%f,%f,%f,%f,%f,%f,%f,%f,%f\n",getTemp(),flow(), carbon(),s1(),s2(),s3(),s4(),s5(),s6(),s7(),s8());
- sol=0; //Solenoid is OFF
- flage=1; //breakes the loop
- }
- }
- solend =0; //end of this section
- led=1.00f; //LED is back to full brightness
- bf=0; //reset the detecting base flow flag
- fin=1; //enables the next section flag
- }
- if((carbon()<10000) and (fin ==1))
- {
- //User has to wait for the CO2 level to drop less than 1% before testing again.
- //Once it is less than 1%, all the flags and parameters used in calculations are reset
- measurement_started =0;
- solstart=0;
- sum=0;
- var=0.0;
- sigma=0.0;
- difSum=0;
- sum2=0;
- var2=0.0;
- sigma2=0.0;
- difSum2=0;
- avg2=0;
- avg=0;
- flags=0;
- flage=0;
- fin=0;
- }
+ char wInit[2];
+ wInit[0]=0xF4;
+// wInit[1]=0x00;
+// char rInit[1];
+
+ i2c.write(addr,wInit,1);
+ wait(1);
+
+ i2c.write(addr,wS,1);
+ i2c.read(addr,rS,1);
+ pc.printf("Status after init: %x\n",rS[0]);
+ wait(2);
+
+ char wMode[2];
+ wMode[0]=0x01;
+ wMode[1]=0x40;
+ char rMode[1];
+
+ i2c.write(addr,wMode,2);
+ i2c.read(addr,rMode,1);
+ pc.printf("Mode: %x\n",rMode[0]);
+ wait(1);
+
+ char wE[1];
+ wE[0]=0xE0;
+ char rE[1];
+
+ char wData[1];
+ wData[0]=0x02;
+ char rData[6];
+
+
+ while(1){
+ i2c.write(addr,wData,1); //co2 and tvoc
+ i2c.read(addr,rData,6);
+
+ int CO2=(rData[0]<<8)+rData[1];
+ int TVOC=(rData[2]<<8)+rData[3];
+
+
+ pc.printf("CO2: %i ppm, TVOC: %i ppb,Status: %x, Error: %x\n",CO2,TVOC,rData[4],rData[5]);
+ wait(0.1);
}
+
}
\ No newline at end of file
--- a/mbed.bld Fri Jul 26 09:31:58 2019 +0000 +++ b/mbed.bld Fri May 01 14:30:55 2020 +0000 @@ -1,1 +1,1 @@ -https://os.mbed.com/users/mbed_official/code/mbed/builds/3a7713b1edbc \ No newline at end of file +https://os.mbed.com/users/mbed_official/code/mbed/builds/65be27845400 \ No newline at end of file